Miyakogusa Predicted Gene

Lj0g3v0307359.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L482_SOYBN 506 77.8 86.3 (tr|I1L482) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G52450.1 426 69.7 81.6 | Symbols: | MATE efflux family protein | chr5:21289042-21291749 REVERSE LENGTH=486
Medicago Medtr6g081410.1 471 74.4 86.7 | MATE efflux family protein | HC | chr6:30489199-30482425 | 20130731
Soybean Glyma09g31030.1 506 77.8 86.3  
LJGI gnl|LJGI|TC69358 396 85.8 85.8 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (30%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0307359.1 length: 311 aa.
IPR002528 Multi antimicrobial extrusion protein
method AccNumber shortName E-value location
Biological Process GO:0006855 drug transmembrane transport    
Molecular Function GO:0015238 drug transmembrane transporter activity    
Molecular Function GO:0015297 antiporter activity    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF01554 MatE 2.7e-33 39-199
HMMTigr TIGR00797 matE: 3.7e-60 39-310
no_ID  
HMMPanther PTHR11206 MULTIDRUG 5.6e-156 2-310
HMMPanther PTHR11206:SF21 MATE 5.6e-156 2-310
Putative transmembrane regions
  From To
TM segments
SOSUI		 36 58
67 89
114 136
147 169
181 203
211 233
260 282
288 310
Wolf-PSORT
Lj0g3v0307359.1	plas 7, vacu 2, E.R. 2, golg 2, E.R._vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0307359.1