Miyakogusa Predicted Gene

Lj0g3v0306559.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JYE2_MEDTR 744 79.1 84.8 (tr|G7JYE2) Choline transporter-like protein 5-A OS=Medicago truncatula GN=MTR_5g054780 PE=4 SV=1
TAIR_pep AT1G25500.2 573 67.5 77.7 | Symbols: | Plasma-membrane choline transporter family protein | chr1:8955437-8957793 REVERSE LENGTH=488
Medicago Medtr5g054780.1 744 79.1 84.8 | plasma-membrane choline transporter family protein | HC | chr5:22571945-22576944 | 20130731
Soybean Glyma10g42290.1 704 73.8 82.0  
LJGI gnl|LJGI|GO033671 95.6 88.0 88.0  
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0306559.1 length: 462 aa.
IPR007603 Choline transporter-like
method AccNumber shortName E-value location
HMMPanther PTHR12385 CTL 1.5e-150 33-451
HMMPfam PF04515 Choline_transpo 3.9e-71 117-418
no_ID  
HMMPanther PTHR12385:SF4 CTL2-RELATED 1.5e-150 33-451
Seg seg seg NA 20-32
75-85
110-126
197-205
Putative transmembrane regions
  From To
TM segments
SOSUI		 11 33
63 85
98 120
137 159
165 187
203 225
246 268
283 305
340 362
382 404
Wolf-PSORT
Lj0g3v0306559.1	chlo 6, plas 3, E.R. 3, chlo_mito 3, E.R._plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0306559.1