Miyakogusa Predicted Gene

Lj0g3v0306429.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MYL7_SOYBN 1011 91.0 94.0 (tr|I1MYL7) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT1G24510.1 962 85.8 92.7 | Symbols: | TCP-1/cpn60 chaperonin family protein | chr1:8685504-8688101 REVERSE LENGTH=535
Medicago Medtr3g086330.1 994 89.5 93.3 | TCP-1/cpn60 chaperonin family protein | HC | chr3:39090318-39085809 | 20130731
Soybean Glyma18g01580.1 1011 91.0 94.0  
LJGI gnl|LJGI|TC62538 3188 100.0 100.0 homologue to UniRef100_A7P458 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0306429.1 length: 535 aa.
IPR002194 Chaperonin TCP-1, conserved site
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006457 protein folding    
Molecular Function GO:0051082 unfolded protein binding    
PatternScan PS00750 TCP1_1 NA 45-57
PatternScan PS00751 TCP1_2 NA 66-82
PatternScan PS00995 TCP1_3 NA 94-102
IPR002423 Chaperonin Cpn60/TCP-1
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0044267 cellular protein metabolic process    
HMMPanther PTHR11353 CHAPERONIN 0 1-532
HMMPfam PF00118 Cpn60_TCP1 7.9e-150 40-531
superfamily SSF48592 GroEL 3.8e-87 19-534
IPR012718 T-complex protein 1, epsilon subunit
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006457 protein folding    
Molecular Function GO:0051082 unfolded protein binding    
HMMPanther PTHR11353:SF25 CHAPERONIN 0 1-532
HMMTigr TIGR02343 chap_CCT_epsi: 1e-299 3-532
IPR017998 Chaperone tailless complex polypeptide 1 (TCP-1)
FPrintScan PR00304 TCOMPLEXTCP1 2.8e-30 42-58
64-82
94-113
380-402
414-426
IPR027409 GroEL-like apical domain
Gene3D G3DSA:3.50.7.10 no description 1.1e-59 219-380
superfamily SSF52029 GroEL 8.2e-56 221-374
IPR027410 TCP-1-like chaperonin intermediate domain
Gene3D G3DSA:3.30.260.10 no description 3.7e-32 381-410
IPR027413 GroEL-like equatorial domain
Gene3D G3DSA:1.10.560.10 no description 5.9e-91 411-531
no_ID  
Seg seg seg NA 108-123
185-193
superfamily SSF54849 GroEL-intermediate 5.6e-31 154-412
Wolf-PSORT
Lj0g3v0306429.1	cyto 9, chlo 2, nucl 1, mito 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0306429.1