Miyakogusa Predicted Gene

Lj0g3v0306109.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7IBH4_MEDTR 884 61.3 71.5 (tr|G7IBH4) Leucine-rich repeat receptor-like protein kinase OS=Medicago truncatula GN=MTR_1g038890 PE=4 SV=1
TAIR_pep AT4G08850.1 609 44.0 61.4 | Symbols: | Leucine-rich repeat receptor-like protein kinase family protein | chr4:5636693-5640496 REVERSE LENGTH=1045
Medicago Medtr1g038890.1 884 61.3 71.5 | LRR receptor-like kinase family protein | LC | chr1:14465720-14469232 | 20130731
Soybean Glyma0090s00230.1 871 62.5 74.7  
LJGI gnl|LJGI|TC60303 642 99.7 99.7 similar to UniRef100_Q75WU3 Cluster: Leucine-rich repeat receptor-like protein kinase 1; n=1; Populus nigra|Rep: Leucine-rich repeat receptor-like protein kinase 1 - Populus nigra (Lombardy poplar), partial (12%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0306109.1 length: 729 aa.
IPR000719 Protein kinase, catalytic domain
method AccNumber shortName E-value location
Molecular Function GO:0004672 protein kinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006468 protein phosphorylation    
HMMPfam PF00069 Pkinase 1.9e-38 543-729
ProfileScan PS50011 PROTEIN_KINASE_DOM 32.245 540-729
IPR001611 Leucine-rich repeat
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.62 28-49
ProfileScan PS51450 LRR 5.933 28-50
148-170
268-291
244-266
340-362
364-386
388-409
IPR002290 Serine/threonine- / dual specificity protein kinase, catalytic domain
Molecular Function GO:0004672 protein kinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006468 protein phosphorylation    
HMMSmart SM00220 Serine/Threonine 1e-11 540-729
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 87 26-50
98-122
146-170
267-290
362-386
IPR008266 Tyrosine-protein kinase, active site
Molecular Function GO:0004713 protein tyrosine kinase activity    
Biological Process GO:0006468 protein phosphorylation    
PatternScan PS00109 PROTEIN_KINASE_TYR NA 664-676
IPR011009 Protein kinase-like domain
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups    
superfamily SSF56112 Protein 1.2e-59 510-729
IPR013320 Concanavalin A-like lectin/glucanase, subgroup
Gene3D G3DSA:2.60.120.200 no description 1.2e-08 461-548
IPR020635 Tyrosine-protein kinase, catalytic domain
Molecular Function GO:0004713 protein tyrosine kinase activity    
Biological Process GO:0006468 protein phosphorylation    
HMMSmart SM00219 Tyrosine 1e-08 540-729
IPR025875 Leucine rich repeat 4
HMMPfam PF12799 LRR_4 1.7e-06 244-280
no_ID  
Gene3D G3DSA:1.10.510.10 no description 2.8e-33 606-729
Gene3D G3DSA:3.30.200.20 no description 2.7e-19 549-605
Gene3D G3DSA:3.80.10.10 no description 3e-57 4-213
214-449
HMMPanther PTHR24420 FAMILY 1.5e-243 9-729
HMMPfam PF13855 LRR_8 2.2e-10 365-423
Seg seg seg NA 25-39
125-136
332-349
superfamily SSF52047 RNI-like 1.1e-51 8-256
superfamily SSF52058 L 4.8e-61 191-449
Putative transmembrane regions
  From To
TM segments
SOSUI		 473 495
Wolf-PSORT
Lj0g3v0306109.1	vacu 3, E.R. 3, E.R._vacu 3, chlo 2, extr 2, E.R._plas 2, cyto_E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0306109.1