Miyakogusa Predicted Gene

Lj0g3v0304929.3
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1N770_SOYBN 122 88.2 97.1 (tr|I1N770) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G24170.1 103 68.1 83.3 | Symbols: | Got1/Sft2-like vescicle transport protein family | chr5:8189744-8191355 REVERSE LENGTH=163
Medicago Medtr1g026920.2 121 84.3 95.7 | Got1/SFT2-like vescicle transporter family protein | HC | chr1:8852374-8858380 | 20130731
Soybean Glyma19g16660.1 122 88.2 97.1  
LJGI gnl|LJGI|BP050071 438 100.0 100.0 similar to UniRef100_A7QEQ0 Cluster: Chromosome chr16 scaffold_86, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_86, whole genome shotgun sequence - Vitis vinifera (Grape), partial (41%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0304929.3 length: 72 aa.
IPR007305 Vesicle transport protein, Got1/SFT2-like
method AccNumber shortName E-value location
Biological Process GO:0016192 vesicle-mediated transport    
HMMPfam PF04178 Got1 3.6e-22 1-69
IPR011691 Vesicle transport protein, SFT2-like
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
HMMPanther PTHR23137 UNCHARACTERIZED 5.3e-19 1-68
Putative transmembrane regions
  From To
TM segments
SOSUI		 8 30
46 68
Wolf-PSORT
Lj0g3v0304929.3	cyto 7, pero 3, nucl 1.5, cysk_nucl 1.5, plas 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0304929.3 Not targeted -43.109 -32.087 -7.298 60.43% -3.724