Miyakogusa Predicted Gene

Lj0g3v0304419.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MEF7_SOYBN 116 71.8 79.5 (tr|K7MEF7) Uncharacterized protein (Fragment) OS=Glycine max PE=4 SV=1
TAIR_pep AT3G05200.1 73.9 39.1 57.6 | Symbols: ATL6 | RING/U-box superfamily protein | chr3:1477377-1478573 FORWARD LENGTH=398
Medicago Medtr8g019710.1 154 64.5 73.4 | zinc finger, C3HC4 type (RING finger) protein | HC | chr8:7010138-7009722 | 20130731
Soybean Glyma07g04130.1 126 66.3 77.2  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0304419.1 length: 143 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 5.9e-16 75-119
HMMSmart SM00184 Ring 3.8e-05 76-117
ProfileScan PS50089 ZF_RING_2 12.224 76-118
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.7e-17 72-121
no_ID  
HMMPanther PTHR14155 RING 4.2e-19 57-143
HMMPanther PTHR14155:SF2 RING 4.2e-19 57-143
Seg seg seg NA 6-23
33-41
superfamily SSF57850 RING/U-box 4.7e-19 46-124
Putative transmembrane regions
  From To
TM segments
SOSUI		 5 27
Wolf-PSORT
Lj0g3v0304419.1	extr 12, cyto 1, E.R. 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0304419.1