Miyakogusa Predicted Gene
- Lj0g3v0304279.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7LSV1_SOYBN |
160 |
82.2 |
93.3 |
(tr|K7LSV1) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT4G38840.1 |
117 |
60.6 |
76.8 |
| Symbols: | SAUR-like auxin-responsive protein family | chr4:18125174-18125473 REVERSE LENGTH=99 |
| Medicago |
Medtr4g072370.1 |
160 |
86.8 |
92.3 |
| SAUR-like auxin-responsive family protein | HC | chr4:27445106-27444636 | 20130731 |
| Soybean |
Glyma12g03950.1 |
160 |
81.1 |
95.6 |
|
| LJGI |
gnl|LJGI|GO028197 |
143 |
84.4 |
84.4 |
similar to UniRef100_P33083 Cluster: Auxin-induced protein 6B; n=1; Glycine max|Rep: Auxin-induced protein 6B - Glycine max (Soybean), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0304279.1 |
length: 91 aa. |
| IPR003676 |
Auxin responsive SAUR protein |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF02519 |
Auxin_inducible |
1.8e-31 |
12-89 |
| no_ID |
|
| HMMPanther |
PTHR31929 |
FAMILY |
5.1e-30 |
26-90 |
- Wolf-PSORT
Lj0g3v0304279.1 nucl 5, chlo 4, cyto_nucl 4, plas 2.5, chlo_mito 2.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0304279.1 |
|