Miyakogusa Predicted Gene
- Lj0g3v0304239.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3S900_LOTJA |
151 |
82.2 |
82.2 |
(tr|I3S900) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1 |
| TAIR_pep |
AT4G38840.1 |
88.2 |
51.2 |
69.8 |
| Symbols: | SAUR-like auxin-responsive protein family | chr4:18125174-18125473 REVERSE LENGTH=99 |
| Medicago |
Medtr4g072240.1 |
130 |
70.3 |
76.9 |
| SAUR-like auxin-responsive family protein | HC | chr4:27414538-27414203 | 20130731 |
| Soybean |
Glyma12g03920.1 |
130 |
68.5 |
77.2 |
|
| LJGI |
gnl|LJGI|TC75973 |
375 |
92.6 |
92.6 |
similar to UniRef100_P33079 Cluster: Auxin-induced protein 10A5; n=1; Glycine max|Rep: Auxin-induced protein 10A5 - Glycine max (Soybean), partial (90%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0304239.1 |
length: 90 aa. |
| IPR003676 |
Auxin responsive SAUR protein |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF02519 |
Auxin_inducible |
1.4e-30 |
16-88 |
| no_ID |
|
| HMMPanther |
PTHR31929 |
FAMILY |
4.9e-27 |
26-89 |
| Seg |
seg |
seg |
NA |
53-62 |
- Wolf-PSORT
Lj0g3v0304239.1 mito 7, nucl 4.5, cyto_nucl 3, chlo 1, plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0304239.1 |
|