Miyakogusa Predicted Gene

Lj0g3v0304209.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T625_LOTJA 186 95.9 96.9 (tr|I3T625) Ribosomal protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT2G27530.2 178 89.7 95.9 | Symbols: PGY1 | Ribosomal protein L1p/L10e family | chr2:11763443-11764570 REVERSE LENGTH=216
Medicago Medtr2g086500.2 184 93.8 96.9 | ribosomal protein L1p/L10e family protein | HC | chr2:36366473-36369406 | 20130731
Soybean Glyma13g39270.2 186 94.8 96.9  
LJGI gnl|LJGI|TC57199 545 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0304209.1 length: 110 aa.
IPR002143 Ribosomal protein L1
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0003735 structural constituent of ribosome    
Biological Process GO:0006412 translation    
Cellular Component GO:0015934 large ribosomal subunit    
HMMPfam PF00687 Ribosomal_L1 2.4e-23 2-98
IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich
Molecular Function GO:0003735 structural constituent of ribosome    
Gene3D G3DSA:3.30.190.20 no description 0.00011 41-93
IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Gene3D G3DSA:3.40.50.790 no description 2.8e-16 2-40
IPR023673 Ribosomal protein L1, conserved site
PatternScan PS01199 RIBOSOMAL_L1 NA 10-29
IPR023674 Ribosomal protein L1, superfamily
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0015934 large ribosomal subunit    
superfamily SSF56808 Ribosomal 1.7e-27 2-99
no_ID  
HMMPanther PTHR23105 RIBOSOMAL 1.8e-53 3-99
HMMPanther PTHR23105:SF4 60S 1.8e-53 3-99
Wolf-PSORT
Lj0g3v0304209.1	cyto 5, mito 3, nucl 2, extr 2, cysk 2, cysk_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0304209.1