Miyakogusa Predicted Gene

Lj0g3v0303699.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LW88_SOYBN 175 80.8 90.9 (tr|K7LW88) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G21880.1 109 48.5 75.3 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr4:11605156-11610651 FORWARD LENGTH=843
Medicago Medtr4g081220.1 103 52.5 70.7 | PPR containing plant-like protein | HC | chr4:31456316-31468677 | 20130731
Soybean Glyma12g34220.1 174 80.8 90.9  
LJGI gnl|LJGI|TC68036 214 98.4 98.4 weakly similar to UniRef100_A7P0Y7 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (44%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0303699.1 length: 110 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMTigr TIGR00756 PPR: 0.00053 47-79
ProfileScan PS51375 PPR 8.857 44-78
no_ID  
HMMPanther PTHR24015 FAMILY 2.5e-24 1-97
HMMPanther PTHR24015:SF34 PENTATRICOPEPTIDE 2.5e-24 1-97
Wolf-PSORT
Lj0g3v0303699.1	cyto 9, nucl 2, pero 1, cysk 1, golg 1, nucl_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0303699.1