| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | I1JX77_SOYBN | 1039 | 86.1 | 91.9 | (tr|I1JX77) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep | AT4G16835.1 | 791 | 64.4 | 80.0 | | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:9472763-9474803 FORWARD LENGTH=656 |
| Medicago | Medtr4g099480.1 | 1008 | 82.8 | 91.2 | | pentatricopeptide (PPR) repeat protein | HC | chr4:41303481-41301142 | 20130731 |
| Soybean | Glyma04g35630.1 | 1039 | 86.1 | 91.9 | |
| LJGI | --No_Hits-- |
| Lj0g3v0303639.1 | length: 569 aa. | |||
| IPR002885 | Pentatricopeptide repeat | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| HMMPfam | PF01535 | PPR | 0.044 | 71-100 101-123 337-360 |
| HMMPfam | PF12854 | PPR_1 | 8.3e-08 | 130-158 |
| HMMPfam | PF13041 | PPR_2 | 1e-12 | 161-208 261-308 |
| HMMPfam | PF13812 | PPR_3 | 0.31 | 6-32 236-257 |
| HMMTigr | TIGR00756 | PPR: | 1.6e-09 | 71-101 132-158 163-197 236-264 264-298 |
| ProfileScan | PS51375 | PPR | 6.665 | 5-40 68-102 161-195 130-160 262-296 231-261 333-367 297-327 399-433 |
| IPR011990 | Tetratricopeptide-like helical | |||
| Molecular Function | GO:0005515 | protein binding | ||
| Gene3D | G3DSA:1.25.40.10 | no description | 0.00016 | 235-287 362-421 |
| no_ID | ||||
| HMMPanther | PTHR24015 | FAMILY | 4.7e-286 | 5-569 |
| HMMPanther | PTHR24015:SF169PENTATRICOPEPTIDE | (PPR) | 4.7e-286 | 5-569 |
| HMMPfam | PF14432 | DYW_deaminase | 3.3e-19 | 446-559 |
| Seg | seg | seg | NA | 464-475 |
| superfamily | SSF48452 | TPR-like | 0.0092 | 231-415 96-190 |
Lj0g3v0303639.1 chlo 7, extr 3, cyto 2, nucl 1, plas 1, nucl_plas 1, cyto_pero 1, cyto_E.R. 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj0g3v0303639.1 |