Miyakogusa Predicted Gene

Lj0g3v0302789.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KIC5_SOYBN 433 69.6 76.6 (tr|I1KIC5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G45850.2 224 42.0 54.8 | Symbols: | AT hook motif DNA-binding family protein | chr2:18871901-18873457 REVERSE LENGTH=348
Medicago Medtr8g031100.1 380 63.1 73.5 | AT hook motif DNA-binding family protein | HC | chr8:11612156-11619041 | 20130731
Soybean Glyma07g07870.1 433 69.6 76.6  
LJGI gnl|LJGI|FS334108 920 100.0 100.0 similar to UniRef100_A7PZC7 Cluster: Chromosome chr15 scaffold_40, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_40, whole genome shotgun sequence - Vitis vinifera (Grape), partial (28%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0302789.1 length: 332 aa.
IPR005175 Domain of unknown function DUF296
method AccNumber shortName E-value location
HMMPfam PF03479 DUF296 1.1e-35 144-260
IPR017956 AT hook, DNA-binding motif
Molecular Function GO:0003677 DNA binding    
HMMSmart SM00384 DNA 9.2 78-90
114-126
no_ID  
Gene3D G3DSA:3.30.1330.80 no description 9.8e-28 144-281
HMMPanther PTHR31500 FAMILY 1e-89 1-331
HMMPanther PTHR31500:SF0 SUBFAMILY 1e-89 1-331
Seg seg seg NA 111-127
235-245
superfamily SSF117856 AF0104/ALDC/Ptd012-like 2.5e-28 144-284
Putative transmembrane regions
  From To
TM segments
SOSUI		 240 262
Wolf-PSORT
Lj0g3v0302789.1	nucl 9, extr 2, chlo 1, mito 1, plas 1, chlo_mito 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0302789.1