Miyakogusa Predicted Gene

Lj0g3v0302209.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LVH5_SOYBN 941 84.4 88.4 (tr|I1LVH5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G66340.1 826 75.4 82.4 | Symbols: ETR1, EIN1, ETR, AtETR1 | Signal transduction histidine kinase, hybrid-type, ethylene sensor | chr1:24734698-24737366 FORWARD LENGTH=738
Medicago Medtr4g031150.1 924 82.4 87.2 | hybrid sensory histidine kinase | HC | chr4:10593442-10597271 | 20130731
Soybean Glyma12g37050.1 941 84.4 88.4  
LJGI gnl|LJGI|TC64110 844 99.8 99.8 similar to UniRef100_A6YAQ1 Cluster: Ethylene receptor; n=1; Glycine max|Rep: Ethylene receptor - Glycine max (Soybean), partial (32%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0302209.2 length: 546 aa.
IPR003018 GAF domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF01590 GAF 8.9e-16 55-204
HMMSmart SM00065 Domain 1.4e-17 55-214
IPR003594 Histidine kinase-like ATPase, ATP-binding domain
Molecular Function GO:0005524 ATP binding    
Gene3D G3DSA:3.30.565.10 no description 2.4e-35 326-545
HMMPfam PF02518 HATPase_c 1.2e-26 352-482
HMMSmart SM00387 Histidine 3.1e-30 352-484
superfamily SSF55874 ATPase 1.4e-35 305-480
IPR003661 Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
Molecular Function GO:0000155 phosphorelay sensor kinase activity    
Biological Process GO:0007165 signal transduction    
Cellular Component GO:0016020 membrane    
HMMPfam PF00512 HisKA 1.7e-17 241-305
HMMSmart SM00388 His 1e-20 240-305
IPR004358 Signal transduction histidine kinase-related protein, C-terminal
Biological Process GO:0016310 phosphorylation    
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups    
FPrintScan PR00344 BCTRLSENSOR 1.5e-08 408-422
426-436
443-461
IPR005467 Signal transduction histidine kinase, core
ProfileScan PS50109 HIS_KIN 44.264 247-484
IPR009082 Signal transduction histidine kinase, homodimeric domain
Molecular Function GO:0004871 signal transducer activity    
Biological Process GO:0007165 signal transduction    
Gene3D G3DSA:1.10.287.130 no description 2.2e-11 233-301
superfamily SSF47384 Homodimeric 4.5e-19 222-307
no_ID  
Gene3D G3DSA:3.30.450.40 no description 2.6e-15 34-217
HMMPanther PTHR24423 TWO 1e-64 15-545
Seg seg seg NA 186-196
230-241
262-275
superfamily SSF55781 GAF 2e-16 55-218
Wolf-PSORT
Lj0g3v0302209.2	cyto 7, chlo 3, nucl 1, vacu 1, pero 1, golg 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0302209.2