Miyakogusa Predicted Gene

Lj0g3v0302029.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KA24_SOYBN 728 75.4 82.1 (tr|I1KA24) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G22040.1 524 57.2 71.1 | Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr1:7768370-7769797 FORWARD LENGTH=475
Medicago Medtr3g073640.1 718 74.7 82.0 | galactose oxidase/kelch repeat protein | HC | chr3:33212096-33209398 | 20130731
Soybean Glyma06g11210.1 728 75.4 82.1  
LJGI gnl|LJGI|TC63341 1324 100.0 100.0 similar to UniRef100_A7NV34 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (41%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0302029.1 length: 447 aa.
IPR001810 F-box domain, cyclin-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMSmart SM00256 A 0.00058 46-86
ProfileScan PS50181 FBOX 10.478 40-86
superfamily SSF81383 F-box 2.6e-06 38-137
IPR006652 Kelch repeat type 1
Molecular Function GO:0005515 protein binding    
HMMPfam PF01344 Kelch_1 1.1e-11 170-215
218-266
HMMSmart SM00612 no description 2e-05 182-228
229-279
IPR015916 Galactose oxidase, beta-propeller
Gene3D G3DSA:2.130.10.80 no description 2.3e-43 170-361
no_ID  
Gene3D G3DSA:1.20.1280.50 no description 9.3e-05 43-76
HMMPanther PTHR24414 FAMILY 7.7e-189 24-432
HMMPanther PTHR24414:SF13 SUBFAMILY 7.7e-189 24-432
HMMPfam PF12937 F-box-like 1.4e-05 43-84
Seg seg seg NA 355-367
408-421
superfamily SSF117281 Kelch 2.4e-38 93-346
Wolf-PSORT
Lj0g3v0302029.1	cyto 6, chlo 5, extr 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0302029.1