Miyakogusa Predicted Gene

Lj0g3v0301929.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q2HSH7_MEDTR 218 70.4 74.1 (tr|Q2HSH7) Histone deacetylase OS=Medicago truncatula GN=MTR_2g087270 PE=4 SV=1
TAIR_pep AT1G08460.1 183 58.9 69.3 | Symbols: HDA08, HDA8, ATHDA8 | histone deacetylase 8 | chr1:2672527-2674469 FORWARD LENGTH=377
Medicago Medtr2g087270.1 218 70.4 74.1 | histone deacetylase superfamily protein | HC | chr2:36680260-36677137 | 20130731
Soybean Glyma12g31380.1 218 71.0 74.7  
LJGI gnl|LJGI|BP079770 242 99.2 99.2 similar to UniRef100_Q2HSH7 Cluster: Histone deacetylase superfamily; n=1; Medicago truncatula|Rep: Histone deacetylase superfamily - Medicago truncatula (Barrel medic), partial (27%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0301929.1 length: 137 aa.
IPR000286 Histone deacetylase superfamily
method AccNumber shortName E-value location
HMMPanther PTHR10625 HISTONE 2.8e-62 12-135
IPR023801 Histone deacetylase domain
Gene3D G3DSA:3.40.800.20 no description 5.9e-06 9-75
76-134
HMMPfam PF00850 Hist_deacetyl 2.7e-06 9-74
77-134
no_ID  
HMMPanther PTHR10625:SF18 HISTONE 2.8e-62 12-135
superfamily SSF52768 Arginase/deacetylase 5.9e-26 12-135
Wolf-PSORT
Lj0g3v0301929.1	nucl 5, chlo 3, nucl_plas 3, cyto 2, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0301929.1