Miyakogusa Predicted Gene
- Lj0g3v0301919.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3STU3_LOTJA |
278 |
99.3 |
99.3 |
(tr|I3STU3) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G14300.2 |
226 |
76.6 |
90.5 |
| Symbols: | ARM repeat superfamily protein | chr1:4882654-4884686 REVERSE LENGTH=377 |
| Medicago |
Medtr8g055880.1 |
267 |
93.4 |
97.1 |
| armadillo/beta-catenin-like repeat protein | HC | chr8:24351347-24344517 | 20130731 |
| Soybean |
Glyma08g41190.2 |
261 |
91.2 |
94.9 |
|
| LJGI |
gnl|LJGI|TC69296 |
815 |
100.0 |
100.0 |
similar to UniRef100_A7QEF1 Cluster: Chromosome chr1 scaffold_84, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_84, whole genome shotgun sequence - Vitis vinifera (Grape), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0301919.2 |
length: 137 aa. |
| IPR007205 |
FAM203 N-terminal |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF04063 |
DUF383 |
1.1e-30 |
1-135 |
| IPR011989 |
Armadillo-like helical |
| Gene3D |
G3DSA:1.25.10.10 |
no description |
5.8e-05 |
32-110 |
| no_ID |
|
| HMMPanther |
PTHR13387 |
FAMILY |
2.1e-79 |
1-137 |
| HMMPanther |
PTHR13387:SF9 |
BINDING |
2.1e-79 |
1-137 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
1 |
23 |
| 109 |
131 |
- Wolf-PSORT
Lj0g3v0301919.2 golg 4, nucl 3, golg_plas 3, cyto 2, plas 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0301919.2 |
|