| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | K7K0Q7_SOYBN | 2568 | 79.6 | 84.9 | (tr|K7K0Q7) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT1G55325.2 | 1646 | 55.0 | 67.5 | | Symbols: GCT | RNA polymerase II transcription mediators | chr1:20637594-20647714 FORWARD LENGTH=2001 |
| Medicago | Medtr3g083500.2 | 2520 | 78.3 | 83.6 | | mediator of RNA polymerase II transcription subunit 13 | HC | chr3:37686050-37663910 | 20130731 |
| Soybean | Glyma18g00280.1 | 1425 | 83.6 | 87.3 | |
| LJGI | gnl|LJGI|FS322854 | 1314 | 99.4 | 99.4 | weakly similar to UniRef100_A7P086 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (15%) |
| Lj0g3v0301409.3 | length: 1591 aa. | |||
| IPR009401 | Mediator complex, subunit Med13 | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0001104 | RNA polymerase II transcription cofactor activity | ||
| Biological Process | GO:0006357 | regulation of transcription from RNA polymerase II promoter | ||
| Cellular Component | GO:0016592 | mediator complex | ||
| HMMPfam | PF06333 | Med13_C | 1.5e-06 | 1186-1390 |
| no_ID | ||||
| HMMPanther | PTHR12950 | FAMILY | 3.2e-262 | 753-1582 |
| HMMPanther | PTHR12950:SF16 | MEDIATOR | 3.2e-262 | 753-1582 |
| Seg | seg | seg | NA | 35-59 165-174 312-320 501-512 704-716 941-955 1166-1185 1329-1339 1534-1548 |
Lj0g3v0301409.3 nucl 6.5, cysk_nucl 4, vacu 3, extr 2, chlo 1, mito 1, chlo_mito 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj0g3v0301409.3 | Not targeted | -38.383 | -0.711 | -1.793 | 49.59% | -35.880 |