database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
---|---|---|---|---|---|
TrEMBL | I1KA62_SOYBN | 1127 | 80.1 | 88.1 | (tr|I1KA62) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
TAIR_pep | AT4G08210.1 | 734 | 52.4 | 70.2 | | Symbols: | Pentatricopeptide repeat (PPR-like) superfamily protein | chr4:5183813-5185873 REVERSE LENGTH=686 |
Medicago | Medtr3g072900.1 | 1121 | 77.9 | 88.2 | | PPR containing plant-like protein | HC | chr3:32815251-32818532 | 20130731 |
Soybean | Glyma06g11520.1 | 1127 | 80.1 | 88.1 | |
LJGI | gnl|LJGI|FS338724 | 1086 | 100.0 | 100.0 | weakly similar to UniRef100_A7NV79 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%) |
Lj0g3v0301139.1 | length: 689 aa. | |||
IPR002885 | Pentatricopeptide repeat | |||
---|---|---|---|---|
method | AccNumber | shortName | E-value | location |
HMMPfam | PF01535 | PPR | 0.012 | 41-68 142-170 173-199 275-296 310-338 381-407 409-438 482-503 511-539 582-606 |
HMMPfam | PF13041 | PPR_2 | 2.1e-08 | 68-115 |
HMMPfam | PF13812 | PPR_3 | 0.23 | 550-578 |
HMMTigr | TIGR00756 | PPR: | 3.2e-06 | 42-70 70-100 173-199 511-544 |
ProfileScan | PS51375 | PPR | 6.215 | 68-102 37-67 170-204 139-169 104-138 235-269 306-340 270-304 407-441 376-406 341-375 508-542 477-507 543-578 579-609 645-679 |
IPR011990 | Tetratricopeptide-like helical | |||
Molecular Function | GO:0005515 | protein binding | ||
Gene3D | G3DSA:1.25.40.10 | no description | 1.9e-09 | 642-663 |
no_ID | ||||
HMMPanther | PTHR24015 | FAMILY | 4.3e-214 | 22-687 |
HMMPanther | PTHR24015:SF103SUBFAMILY | NOT | 4.3e-214 | 22-687 |
superfamily | SSF48452 | TPR-like | 0.00013 | 37-199 |
Lj0g3v0301139.1 chlo 5.5, chlo_mito 5, nucl 4, mito 3.5
entry_id | prediction | score | sppta | spptna | fp | profile |
---|---|---|---|---|---|---|
Lj0g3v0301139.1 |