Miyakogusa Predicted Gene

Lj0g3v0301059.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL K7LPW1_SOYBN 609 78.9 82.4 (tr|K7LPW1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G60450.1 501 74.2 81.8 | Symbols: ARF4 | auxin response factor 4 | chr5:24308558-24312187 REVERSE LENGTH=788
Medicago Medtr4g060460.2 604 78.5 81.9 | auxin response factor-like protein | HC | chr4:22234433-22239989 | 20130731
Soybean Glyma11g15910.1 613 79.4 82.8  
LJGI gnl|LJGI|FS324324 579 100.0 100.0 similar to UniRef100_A7NZG6 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (12%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0301059.1 length: 373 aa.
IPR003340 B3 DNA binding domain
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02362 B3 3.3e-23 163-264
HMMSmart SM01019 B3 1.4e-24 163-265
ProfileScan PS50863 B3 13.028 163-265
IPR010525 Auxin response factor
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Biological Process GO:0009725 response to hormone stimulus    
HMMPfam PF06507 Auxin_resp 9.7e-34 289-371
IPR015300 DNA-binding pseudobarrel domain
Gene3D G3DSA:2.40.330.10 no description 3.8e-40 155-274
superfamily SSF101936 DNA-binding 2.6e-47 146-293
no_ID  
HMMPanther PTHR31384 FAMILY 1.8e-170 49-373
Seg seg seg NA 22-48
132-153
Wolf-PSORT
Lj0g3v0301059.1	nucl 9, chlo 3, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0301059.1