Miyakogusa Predicted Gene

Lj0g3v0300769.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LZ38_SOYBN 473 64.8 73.0 (tr|I1LZ38) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G09760.1 271 45.2 58.8 | Symbols: | RING/U-box superfamily protein | chr3:2992975-2995451 REVERSE LENGTH=491
Medicago Medtr1g064710.1 438 61.9 71.0 | RING/U-box protein | HC | chr1:28480942-28486635 | 20130731
Soybean Glyma13g20250.1 459 64.0 72.2  
LJGI gnl|LJGI|GO010397 827 97.3 97.3 similar to UniRef100_A3UQU1 Cluster: CMP-N-acetylneuraminic acid synthetase; n=1; Vibrio splendidus 12B01|Rep: CMP-N-acetylneuraminic acid synthetase - Vibrio splendidus 12B01, partial (7%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0300769.1 length: 389 aa.
IPR011016 Zinc finger, RING-CH-type
method AccNumber shortName E-value location
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF12906 RINGv 2.7e-11 258-305
HMMSmart SM00744 The 7e-18 257-306
ProfileScan PS51292 ZF_RING_CH 18.929 250-312
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 3.4e-16 252-309
no_ID  
HMMPanther PTHR23012 MEMBRANE 4.1e-99 49-373
HMMPanther PTHR23012:SF25 PREDICTED 4.1e-99 49-373
Seg seg seg NA 98-108
146-160
superfamily SSF57850 RING/U-box 5.7e-13 250-312
Wolf-PSORT
Lj0g3v0300769.1	golg 5, nucl 3, cyto 3, cyto_nucl 3, golg_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0300769.1