Miyakogusa Predicted Gene

Lj0g3v0300699.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1JD00_SOYBN 1025 60.2 68.6 (tr|I1JD00) Uncharacterized protein OS=Glycine max PE=4 SV=2

TAIR_pep AT5G13950.2 403 33.2 49.2 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02290.1); Has 147 Blast hits to 145 proteins in 44 species: Archae - 0; Bacteria - 2; Metazoa - 56; Fungi - 6; Plants - 81; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr5:4496196-4500206 REVERSE LENGTH=939

Medicago Medtr6g033235.1 932 56.7 68.6 | hypothetical protein | HC | chr6:10522219-10530937 | 20130731

Soybean Glyma02g07360.1 1006 60.9 69.4

LJGI gnl|LJGI|TC76595 398 97.7 97.7 similar to UniRef100_Q8HMJ4 Cluster: NADH-ubiquinone oxidoreductase chain 2; n=1; Carapus bermudensis|Rep: NADH-ubiquinone oxidoreductase chain 2 - Carapus bermudensis, partial (6%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0300699.1 length: 840 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 569-581
702-740

Wolf-PSORT

Lj0g3v0300699.1 nucl 11, chlo 1, vacu 1, cysk 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0300699.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1JD00_SOYBN	1025	60.2	68.6	(tr\|I1JD00) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep	AT5G13950.2	403	33.2	49.2	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02290.1); Has 147 Blast hits to 145 proteins in 44 species: Archae - 0; Bacteria - 2; Metazoa - 56; Fungi - 6; Plants - 81; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). \| chr5:4496196-4500206 REVERSE LENGTH=939
Medicago	Medtr6g033235.1	932	56.7	68.6	\| hypothetical protein \| HC \| chr6:10522219-10530937 \| 20130731
Soybean	Glyma02g07360.1	1006	60.9	69.4
LJGI	gnl\|LJGI\|TC76595	398	97.7	97.7	similar to UniRef100_Q8HMJ4 Cluster: NADH-ubiquinone oxidoreductase chain 2; n=1; Carapus bermudensis\|Rep: NADH-ubiquinone oxidoreductase chain 2 - Carapus bermudensis, partial (6%)

no_ID
Lj0g3v0300699.1				length: 840 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	569-581 702-740