Miyakogusa Predicted Gene

Lj0g3v0300669.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SC00_LOTJA 345 87.6 87.6 (tr|I3SC00) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT4G27490.1 268 74.1 84.9 | Symbols: | 3'-5'-exoribonuclease family protein | chr4:13739961-13741647 FORWARD LENGTH=256
Medicago Medtr4g058720.1 301 76.9 81.0 | exosome complex exonuclease RRP41 | HC | chr4:21605546-21609796 | 20130731
Soybean Glyma12g08170.1 301 75.8 80.4  
LJGI gnl|LJGI|TC57236 1122 99.3 99.3  
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0300669.1 length: 194 aa.
IPR001247 Exoribonuclease, phosphorolytic domain 1
method AccNumber shortName E-value location
HMMPfam PF01138 RNase_PH 1.7e-27 40-164
IPR020568 Ribosomal protein S5 domain 2-type fold
superfamily SSF54211 Ribosomal 8.1e-36 31-173
IPR027408 PNPase/RNase PH domain
Gene3D G3DSA:3.30.230.70 no description 4e-14 25-191
no_ID  
HMMPanther PTHR11953 RIBONUCLEASE 4e-58 23-192
Seg seg seg NA 7-18
49-60
Wolf-PSORT
Lj0g3v0300669.1	E.R. 5, chlo 3, nucl 2, plas 2, vacu 2, nucl_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0300669.1