Miyakogusa Predicted Gene
- Lj0g3v0300119.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7K979_MEDTR |
116 |
79.1 |
89.6 |
(tr|G7K979) 2-succinylbenzoate-CoA ligase OS=Medicago truncatula GN=MTR_5g008800 PE=4 SV=1 |
| TAIR_pep |
AT1G76290.1 |
94.4 |
61.2 |
80.6 |
| Symbols: | AMP-dependent synthetase and ligase family protein | chr1:28623443-28625408 REVERSE LENGTH=546 |
| Medicago |
Medtr5g008800.2 |
116 |
79.1 |
89.6 |
| long-chain acyl-CoA synthetase | HC | chr5:1929920-1927424 | 20130731 |
| Soybean |
Glyma01g44250.1 |
102 |
70.0 |
84.3 |
|
| LJGI |
gnl|LJGI|TC68348 |
398 |
100.0 |
100.0 |
weakly similar to UniRef100_Q94JT9 Cluster: At1g20560/F2D10_4; n=1; Arabidopsis thaliana|Rep: At1g20560/F2D10_4 - Arabidopsis thaliana (Mouse-ear cress), partial (39%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0300119.1 |
length: 79 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.40.50.980 |
no description |
8.4e-09 |
14-68 |
| HMMPanther |
PTHR24095 |
FAMILY |
7e-21 |
3-67 |
| HMMPanther |
PTHR24095:SF29 |
SUBFAMILY |
7e-21 |
3-67 |
| superfamily |
SSF56801 |
Acetyl-CoA |
5.9e-10 |
15-67 |
- Wolf-PSORT
Lj0g3v0300119.1 cyto 6, nucl 3, cyto_pero 3, cyto_E.R. 3, cyto_plas 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0300119.1 |
|