Miyakogusa Predicted Gene

Lj0g3v0300059.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K1N2_SOYBN 301 83.0 91.2 (tr|K7K1N2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G70060.1 275 80.2 88.6 | Symbols: SNL4 | SIN3-like 4 | chr1:26383789-26389568 FORWARD LENGTH=1326
Medicago Medtr8g062700.1 265 77.8 86.4 | paired amphipathic helix SIN3-like protein | HC | chr8:26215827-26198402 | 20130731
Soybean Glyma01g04490.3 298 82.9 91.2  
LJGI gnl|LJGI|DC599945 182 86.7 86.7 similar to UniRef100_A7Q2L0 Cluster: Chromosome chr1 scaffold_46, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_46, whole genome shotgun sequence - Vitis vinifera (Grape), partial (6%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0300059.1 length: 172 aa.
IPR003822 Paired amphipathic helix
method AccNumber shortName E-value location
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Gene3D G3DSA:1.20.1160.11 no description 1.8e-26 6-76
91-162
HMMPfam PF02671 PAH 1.3e-20 30-75
116-161
ProfileScan PS51477 PAH 18.074 7-77
93-163
superfamily SSF47762 PAH2 2.7e-23 88-163
2-77
no_ID  
HMMPanther PTHR12346 SIN3B-RELATED 1.3e-91 7-172
Wolf-PSORT
Lj0g3v0300059.1	cyto 8.5, cyto_E.R. 5, chlo 2, nucl 1, mito 1, extr 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0300059.1