Miyakogusa Predicted Gene
- Lj0g3v0299799.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1JHP2_SOYBN |
1179 |
87.5 |
91.6 |
(tr|I1JHP2) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G77130.1 |
863 |
68.1 |
78.5 |
| Symbols: PGSIP2, GUX3 | plant glycogenin-like starch initiation protein 2 | chr1:28979066-28981228 REVERSE LENGTH=618 |
| Medicago |
Medtr1g029130.1 |
1149 |
86.6 |
93.0 |
| UDP-glucuronate:xylan alpha-glucuronosyltransferase | HC | chr1:9941161-9944849 | 20130731 |
| Soybean |
Glyma02g40480.1 |
1179 |
87.5 |
91.6 |
|
| LJGI |
gnl|LJGI|TC66396 |
186 |
79.6 |
79.6 |
similar to UniRef100_A7QB81 Cluster: Chromosome chr4 scaffold_73, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_73, whole genome shotgun sequence - Vitis vinifera (Grape), partial (40%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0299799.1 |
length: 645 aa. |
| IPR002495 |
Glycosyl transferase, family 8 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0016757 |
transferase activity, transferring glycosyl groups |
|
|
| HMMPfam |
PF01501 |
Glyco_transf_8 |
4e-36 |
315-524 |
| no_ID |
|
| Gene3D |
G3DSA:3.90.550.10 |
no description |
2.5e-68 |
309-564 |
| HMMPanther |
PTHR11183 |
GLYCOGENIN |
1.1e-243 |
259-637 |
| HMMPanther |
PTHR11183:SF2 |
GALACTINOL |
1.1e-243 |
259-637 |
| Seg |
seg |
seg |
NA |
179-184 |
| superfamily |
SSF53448 |
Nucleotide-diphospho-sugar |
1.1e-52 |
309-563 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
55 |
77 |
- Wolf-PSORT
Lj0g3v0299799.1 mito 6, nucl 2, cyto 2, plas 2, cyto_nucl 2, nucl_plas 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0299799.1 |
Not targeted |
-23.086 |
-0.101 |
-3.538 |
17.50% |
-19.446
|