Miyakogusa Predicted Gene
- Lj0g3v0298019.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1JUU4_SOYBN |
122 |
67.0 |
76.1 |
(tr|I1JUU4) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT1G52190.1 |
93.6 |
51.1 |
63.6 |
| Symbols: | Major facilitator superfamily protein | chr1:19434671-19438673 FORWARD LENGTH=607 |
| Medicago |
Medtr1g026750.1 |
113 |
61.4 |
69.3 |
| peptide/nitrate transporter plant | LC | chr1:8759408-8754653 | 20130731 |
| Soybean |
Glyma04g08770.1 |
123 |
67.0 |
76.1 |
|
| LJGI |
gnl|LJGI|TC78897 |
317 |
97.7 |
97.7 |
weakly similar to UniRef100_A7P596 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0298019.1 |
length: 89 aa. |
| IPR000109 |
Proton-dependent oligopeptide transporter family |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005215 |
transporter activity |
|
|
| Biological Process |
GO:0006810 |
transport |
|
|
| Cellular Component |
GO:0016020 |
membrane |
|
|
| HMMPanther |
PTHR11654 |
OLIGOPEPTIDE |
4.4e-42 |
1-88 |
| no_ID |
|
| HMMPanther |
PTHR11654:SF58 |
OS04G0491200 |
4.4e-42 |
1-88 |
| Seg |
seg |
seg |
NA |
41-56 |
- Wolf-PSORT
Lj0g3v0298019.1 chlo 8, nucl 2, E.R. 2, cyto 1, plas 1, cysk_nucl 1, E.R._vacu 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0298019.1 |
|