Miyakogusa Predicted Gene
- Lj0g3v0297889.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1NJF1_SOYBN |
578 |
78.2 |
86.3 |
(tr|I1NJF1) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
--No_Hits--
|
|
|
|
|
| Medicago |
--No_Hits--
|
|
|
|
|
| Soybean |
Glyma20g39350.1 |
578 |
78.2 |
86.3 |
|
| LJGI |
gnl|LJGI|BE122602 |
682 |
98.2 |
98.2 |
similar to UniRef100_A7QUT9 Cluster: Chromosome chr1 scaffold_180, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_180, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0297889.1 |
length: 357 aa. |
| IPR006680 |
Amidohydrolase 1 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0016787 |
hydrolase activity |
|
|
| HMMPfam |
PF01979 |
Amidohydro_1 |
7.4e-22 |
68-349 |
| IPR011059 |
Metal-dependent hydrolase, composite domain |
| Molecular Function |
GO:0016810 |
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds |
|
|
| superfamily |
SSF51338 |
Composite |
5e-08 |
10-74 |
| no_ID |
|
| Gene3D |
G3DSA:2.30.40.10 |
no description |
7.1e-11 |
12-79 |
| Gene3D |
G3DSA:3.20.20.140 |
no description |
5e-68 |
80-356 |
| HMMPanther |
PTHR11271 |
CHLOROHYDROLASE |
5e-107 |
11-356 |
| HMMPanther |
PTHR11271:SF7 |
CHLOROHYDROLASE |
5e-107 |
11-356 |
| superfamily |
SSF51556 |
Metallo-dependent |
9.9e-58 |
72-356 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
115 |
137 |
| 139 |
161 |
- Wolf-PSORT
Lj0g3v0297889.1 nucl 4, E.R. 2.5, E.R._plas 2.5, cyto 2, golg 2, cysk_nucl 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0297889.1 |
|