Miyakogusa Predicted Gene
- Lj0g3v0297799.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
database |
Accession |
Score |
Iden (%) |
Posi (%) |
Definition |
TrEMBL |
I1MNV4_SOYBN |
145 |
77.6 |
78.6 |
(tr|I1MNV4) Uncharacterized protein OS=Glycine max PE=3 SV=1 |
TAIR_pep |
AT3G03800.1 |
123 |
64.3 |
74.5 |
| Symbols: SYP131, ATSYP131 | syntaxin of plants 131 | chr3:969314-971460 FORWARD LENGTH=306 |
Medicago |
Medtr6g028140.1 |
140 |
74.5 |
78.6 |
| syntaxin of plants 122 protein | HC | chr6:10021452-10025748 | 20130731 |
Soybean |
Glyma16g27050.1 |
145 |
77.6 |
78.6 |
|
LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0297799.1 |
length: 106 aa. |
IPR010989 |
t-SNARE |
method |
AccNumber |
shortName |
E-value |
location |
Cellular Component |
GO:0016020 |
membrane |
|
|
Biological Process |
GO:0016192 |
vesicle-mediated transport |
|
|
superfamily |
SSF47661 |
t-snare |
1.7e-17 |
1-105 |
no_ID |
|
Coil |
coil |
coiled-coil |
NA |
6-34 |
Gene3D |
G3DSA:1.20.58.70 |
no description |
8.5e-25 |
5-105 |
HMMPanther |
PTHR19957 |
SYNTAXIN |
5.2e-51 |
7-105 |
HMMPanther |
PTHR19957:SF26 |
SYNTAXIN, |
5.2e-51 |
7-105 |
Seg |
seg |
seg |
NA |
29-46 |
- Wolf-PSORT
Lj0g3v0297799.1 mito 6, cyto 4, nucl 3, chlo_mito 3, cyto_mito 3
- PTS1 (Peroxisome targeting signal type 1)
entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
Lj0g3v0297799.1 |
|