Miyakogusa Predicted Gene

Lj0g3v0297399.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SGW4_LOTJA 496 76.3 76.3 (tr|I3SGW4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G54520.1 161 45.2 59.4 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1517 (InterPro:IPR010903); Has 276 Blast hits to 275 proteins in 83 species: Archae - 0; Bacteria - 108; Metazoa - 6; Fungi - 0; Plants - 113; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). | chr1:20363565-20365874 FORWARD LENGTH=391
Medicago Medtr3g063940.2 217 47.5 63.3 | transmembrane protein, putative | HC | chr3:28768782-28763981 | 20130731
Soybean Glyma11g31880.1 258 48.3 60.9  
LJGI gnl|LJGI|GO006797 894 95.5 95.5 similar to UniRef100_A1A4B8 Cluster: Abcf1 protein; n=1; Mus musculus|Rep: Abcf1 protein - Mus musculus (Mouse), partial (6%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0297399.1 length: 333 aa.
IPR010903 Protein of unknown function DUF1517
method AccNumber shortName E-value location
HMMPfam PF07466 DUF1517 6.2e-54 35-321
no_ID  
ProfileScan PS51257 PROKAR_LIPOPROTEIN 5.000 1-28
Seg seg seg NA 17-37
47-61
94-104
240-251
281-293
Putative transmembrane regions
  From To
TM segments
SOSUI		 10 32
Wolf-PSORT
Lj0g3v0297399.1	plas 7, extr 3, vacu 2, chlo 1, golg 1, E.R._vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0297399.1