Miyakogusa Predicted Gene

Lj0g3v0295969.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7LG23_MEDTR 770 72.2 81.2 (tr|G7LG23) Solute carrier family 22 member OS=Medicago truncatula GN=MTR_8g039190 PE=4 SV=1
TAIR_pep AT1G16390.1 461 45.5 67.1 | Symbols: ATOCT3, 3-Oct | organic cation/carnitine transporter 3 | chr1:5602921-5604477 FORWARD LENGTH=518
Medicago Medtr8g039190.1 769 72.2 81.2 | organic cation/carnitine transporter | HC | chr8:14580984-14579013 | 20130731
Soybean Glyma09g00400.1 558 61.3 74.3  
LJGI gnl|LJGI|BP047636 341 87.9 87.9 weakly similar to UniRef100_A7QMK9 Cluster: Chromosome chr19 scaffold_126, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_126, whole genome shotgun sequence - Vitis vinifera (Grape), partial (6%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0295969.1 length: 541 aa.
IPR005828 General substrate transporter
method AccNumber shortName E-value location
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0022857 transmembrane transporter activity    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF00083 Sugar_tr 8.9e-29 90-500
IPR016196 Major facilitator superfamily domain, general substrate transporter
superfamily SSF103473 MFS 1.3e-39 121-497
IPR020846 Major facilitator superfamily domain
ProfileScan PS50850 MFS 15.036 48-497
no_ID  
Gene3D G3DSA:1.20.1250.20 no description 1.3e-07 122-269
320-506
HMMPanther PTHR24064 FAMILY 1.9e-215 5-532
HMMPanther PTHR24064:SF104SUBFAMILY NOT 1.9e-215 5-532
Seg seg seg NA 8-20
77-92
136-153
Putative transmembrane regions
  From To
TM segments
SOSUI		 41 63
132 153
159 181
185 207
232 254
327 349
357 379
386 406
415 437
477 499
Wolf-PSORT
Lj0g3v0295969.1	plas 5, E.R. 4, nucl 2, cyto 2, cyto_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0295969.1