Miyakogusa Predicted Gene

Lj0g3v0295669.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S9N9_LOTJA 440 99.5 99.5 (tr|I3S9N9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G60860.1 426 94.4 98.1 | Symbols: AtRABA1f, RABA1f | RAB GTPase homolog A1F | chr5:24484750-24485565 FORWARD LENGTH=217
Medicago Medtr4g079350.1 439 98.2 99.5 | RAB GTPase-like protein C2B | HC | chr4:30648654-30646057 | 20130731
Soybean Glyma12g14070.1 439 98.2 99.1  
LJGI gnl|LJGI|TC64728 1302 100.0 100.0 homologue to UniRef100_Q08149 Cluster: GTP-binding protein; n=1; Pisum sativum|Rep: GTP-binding protein - Pisum sativum (Garden pea), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0295669.1 length: 217 aa.
IPR001806 Small GTPase superfamily
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
FPrintScan PR00449 RASTRNSFRMNG 3.9e-42 14-35
37-53
55-77
117-130
152-174
HMMPfam PF00071 Ras 9.3e-62 15-175
IPR002041 Ran GTPase
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0006184 GTP catabolic process    
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0006913 nucleocytoplasmic transport    
Biological Process GO:0007165 signal transduction    
HMMSmart SM00176 Ran 2.6e-08 19-216
IPR003578 Small GTPase superfamily, Rho type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMSmart SM00174 Rho 3.7e-12 16-173
IPR003579 Small GTPase superfamily, Rab type
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
Biological Process GO:0015031 protein transport    
HMMSmart SM00175 Rab 1.1e-111 14-177
IPR005225 Small GTP-binding protein domain
Molecular Function GO:0005525 GTP binding    
HMMTigr TIGR00231 small_GTP: 2.2e-40 12-170
IPR020849 Small GTPase superfamily, Ras type
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0006184 GTP catabolic process    
Biological Process GO:0007165 signal transduction    
Cellular Component GO:0016020 membrane    
HMMSmart SM00173 Ras 5.3e-28 11-177
IPR024156 Small GTPase superfamily, ARF type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMSmart SM00177 ARF-like 0.0073 1-179
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 5.2e-66 9-174
no_ID  
Gene3D G3DSA:3.40.50.300 no description 1.2e-71 6-215
HMMPanther PTHR24073 FAMILY 8.9e-125 4-216
HMMPanther PTHR24073:SF87 SUBFAMILY 8.9e-125 4-216
ProfileScan PS51419 RAB 36.111 9-215
Wolf-PSORT
Lj0g3v0295669.1	cyto 11, chlo 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0295669.1