Miyakogusa Predicted Gene

Lj0g3v0295639.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M9Z5_SOYBN 872 75.9 81.9 (tr|I1M9Z5) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT2G25870.1 713 71.0 82.7 | Symbols: | haloacid dehalogenase-like hydrolase family protein | chr2:11031159-11034302 FORWARD LENGTH=584
Medicago Medtr1g007320.3 868 75.9 82.3 | haloacid dehalogenase-like hydrolase | HC | chr1:273357-280352 | 20130731
Soybean Glyma14g21790.1 872 75.9 81.9  
LJGI gnl|LJGI|TC60069 1471 100.0 100.0 similar to UniRef100_A7P4F0 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (31%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0295639.1 length: 571 aa.
IPR000150 Cof protein
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016787 hydrolase activity    
HMMTigr TIGR00099 Cof-subfamily: 3.7e-48 301-566
PatternScan PS01228 COF_1 NA 301-312
IPR002036 Endoribonuclease YbeY
Molecular Function GO:0004222 metalloendopeptidase activity    
Biological Process GO:0006364 rRNA processing    
HAMAP MF_00009 rRNA_matur_factor 21.205 89-267
HMMPfam PF02130 UPF0054 1.3e-35 148-258
HMMTigr TIGR00043 TIGR00043: 2.2e-30 152-258
IPR006379 HAD-superfamily hydrolase, subfamily IIB
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
HMMTigr TIGR01484 HAD-SF-IIB: 2.4e-21 301-538
IPR020549 Endoribonuclease YbeY, conserved site
PatternScan PS01306 UPF0054 NA 227-237
IPR023091 Metalloprotease catalytic domain, predicted
Molecular Function GO:0004222 metalloendopeptidase activity    
Gene3D G3DSA:3.40.390.30 no description 1.4e-41 144-271
IPR023214 HAD-like domain
Gene3D G3DSA:3.40.50.1000 no description 4.6e-46 474-569
HMMPfam PF08282 Hydrolase_3 1.5e-49 302-566
superfamily SSF56784 HAD-like 5e-57 299-569
no_ID  
HMMPanther PTHR10000 PHOSPHOSERINE 1.3e-31 187-566
HMMPanther PTHR10000:SF0 PHOSPHOSERINE 1.3e-31 187-566
PatternScan PS01229 COF_2 NA 520-542
Seg seg seg NA 38-48
241-258
superfamily SSF55486 Metalloproteases 3.2e-36 112-266
Wolf-PSORT
Lj0g3v0295639.1	chlo 12, nucl 1, mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0295639.1