Miyakogusa Predicted Gene

Lj0g3v0295469.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MJ15_SOYBN 950 77.7 86.4 (tr|K7MJ15) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G73400.1 724 61.9 79.2 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:27598106-27599812 FORWARD LENGTH=568
Medicago Medtr6g075180.1 878 80.2 88.1 | PPR containing plant-like protein | HC | chr6:27846701-27844575 | 20130731
Soybean Glyma16g34460.1 868 83.7 92.4  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0295469.1 length: 594 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.00099 263-288
HMMPfam PF12854 PPR_1 4.9e-06 397-428
431-463
HMMPfam PF13041 PPR_2 5.4e-14 327-376
470-517
HMMPfam PF13812 PPR_3 0.00031 294-327
HMMTigr TIGR00756 PPR: 0.00012 262-288
296-328
330-360
369-402
404-437
438-471
474-506
509-539
ProfileScan PS51375 PPR 10.315 259-289
293-327
328-362
366-400
401-435
436-470
471-505
506-540
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 5e-07 258-536
no_ID  
HMMPanther PTHR24015 FAMILY 7.9e-98 138-570
HMMPanther PTHR24015:SF0 SUBFAMILY 7.9e-98 138-570
Seg seg seg NA 97-105
superfamily SSF48452 TPR-like 0.019 433-535
256-357
Wolf-PSORT
Lj0g3v0295469.1	chlo 8, mito 4, nucl 1, pero 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0295469.1