Miyakogusa Predicted Gene
- Lj0g3v0293819.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7IYC8_MEDTR |
159 |
74.1 |
80.2 |
(tr|G7IYC8) NAD(P)H-quinone oxidoreductase chain OS=Medicago truncatula GN=MTR_3g005230 PE=4 SV=1 |
| TAIR_pep |
AT1G58110.2 |
132 |
53.7 |
70.9 |
| Symbols: | Basic-leucine zipper (bZIP) transcription factor family protein | chr1:21515919-21517374 REVERSE LENGTH=374 |
| Medicago |
Medtr3g005230.1 |
159 |
74.1 |
80.2 |
| hypothetical protein | HC | chr3:114308-116138 | 20130731 |
| Soybean |
Glyma05g30170.1 |
142 |
58.1 |
72.1 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0293819.1 |
length: 194 aa. |
| IPR004827 |
Basic-leucine zipper domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003700 |
sequence-specific DNA binding transcription factor activity |
|
|
| Biological Process |
GO:0006355 |
regulation of transcription, DNA-dependent |
|
|
| Molecular Function |
GO:0043565 |
sequence-specific DNA binding |
|
|
| HMMPfam |
PF00170 |
bZIP_1 |
4.2e-05 |
68-117 |
| HMMSmart |
SM00338 |
basic |
0.0009 |
59-119 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
138-162 |
| Gene3D |
G3DSA:1.20.5.170 |
no description |
9.2e-06 |
68-112 |
| HMMPanther |
PTHR13301 |
X-BOX |
3e-12 |
57-157 |
| Seg |
seg |
seg |
NA |
153-162 |
- Wolf-PSORT
Lj0g3v0293819.1 nucl 10.5, cyto_nucl 6, chlo 1, mito 1, plas 1, chlo_mito 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0293819.1 |
|