Miyakogusa Predicted Gene

Lj0g3v0293709.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KFU7_SOYBN 404 66.1 69.3 (tr|I1KFU7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G55620.2 365 73.6 77.6 | Symbols: CLC-F, ATCLC-F | chloride channel F | chr1:20787338-20790990 REVERSE LENGTH=781
Medicago Medtr3g009530.1 441 69.1 73.0 | ClC chloride channel family protein | HC | chr3:2088332-2079303 | 20130731
Soybean Glyma06g47910.1 404 66.1 69.3  
LJGI gnl|LJGI|TC80869 833 99.1 99.1 similar to UniRef100_A7QQF5 Cluster: Chromosome undetermined scaffold_142, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_142, whole genome shotgun sequence - Vitis vinifera (Grape), partial (6%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0293709.1 length: 358 aa.
IPR001807 Chloride channel, voltage gated
method AccNumber shortName E-value location
Molecular Function GO:0005247 voltage-gated chloride channel activity    
Biological Process GO:0006821 chloride transport    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
FPrintScan PR00762 CLCHANNEL 3.8e-09 211-230
262-281
HMMPfam PF00654 Voltage_CLC 8e-26 186-341
IPR014743 Chloride channel, core
Molecular Function GO:0005216 ion channel activity    
Biological Process GO:0055085 transmembrane transport    
Gene3D G3DSA:1.10.3080.10 no description 8e-36 106-328
superfamily SSF81340 Clc 1.3e-32 107-358
no_ID  
HMMPanther PTHR11689 CHLORIDE 2.7e-146 6-332
HMMPanther PTHR11689:SF50 ORF 2.7e-146 6-332
Seg seg seg NA 36-47
64-88
111-124
255-272
Putative transmembrane regions
  From To
TM segments
SOSUI		 108 130
160 182
202 224
259 281
332 354
Wolf-PSORT
Lj0g3v0293709.1	nucl 5, cyto 3, chlo 2, mito 2, plas 2, chlo_mito 2, mito_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0293709.1