Miyakogusa Predicted Gene
- Lj0g3v0293039.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7MRK0_SOYBN |
202 |
76.6 |
87.1 |
(tr|K7MRK0) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G69710.1 |
120 |
47.2 |
66.7 |
| Symbols: | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain | chr1:26222325-26226530 FORWARD LENGTH=1041 |
| Medicago |
Medtr5g089900.1 |
91.7 |
39.2 |
56.1 |
| regulator of chromosome condensation (RCC1) family protein | HC | chr5:39105074-39114126 | 20130731 |
| Soybean |
Glyma18g15520.1 |
200 |
76.6 |
87.1 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0293039.1 |
length: 124 aa. |
| IPR013591 |
Brevis radix-like domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF08381 |
BRX |
2.2e-26 |
64-120 |
| ProfileScan |
PS51514 |
BRX |
27.883 |
65-120 |
| no_ID |
|
| HMMPanther |
PTHR22870 |
REGULATOR |
4.3e-29 |
6-121 |
| HMMPanther |
PTHR22870:SF90 |
REGULATOR |
4.3e-29 |
6-121 |
- Wolf-PSORT
Lj0g3v0293039.1 nucl 8, cyto 2, pero 2, cyto_pero 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0293039.1 |
|