Miyakogusa Predicted Gene
- Lj0g3v0292949.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1KL88_SOYBN |
76.3 |
51.2 |
60.7 |
(tr|I1KL88) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
--No_Hits--
|
|
|
|
|
| Medicago |
Medtr4g092640.1 |
74.7 |
52.4 |
60.7 |
| squalene monooxygenase | HC | chr4:36749132-36744844 | 20130731 |
| Soybean |
Glyma07g30440.1 |
76.3 |
51.2 |
60.7 |
|
| LJGI |
gnl|LJGI|GO036224 |
486 |
99.6 |
99.6 |
homologue to UniRef100_Q2HY08 Cluster: Squalene epoxidase; n=1; Medicago sativa|Rep: Squalene epoxidase - Medicago sativa (Alfalfa), partial (20%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0292949.1 |
length: 83 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.50.50.60 |
no description |
4.7e-05 |
55-82 |
| Seg |
seg |
seg |
NA |
63-78 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
6 |
28 |
| 59 |
81 |
- Wolf-PSORT
Lj0g3v0292949.1 chlo 9, plas 2, nucl 1, mito 1, E.R. 1, golg_plas 1, cysk_plas 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0292949.1 |
|