Miyakogusa Predicted Gene

Lj0g3v0292189.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KIL6_SOYBN 1178 80.2 87.3 (tr|K7KIL6) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT5G11380.1 911 64.6 75.3 | Symbols: DXPS3 | 1-deoxy-D-xylulose 5-phosphate synthase 3 | chr5:3630172-3633250 FORWARD LENGTH=700
Medicago Medtr3g107740.1 1146 78.6 85.8 | 1-deoxy-D-xylulose-5-phosphate synthase | HC | chr3:49718037-49711963 | 20130731
Soybean Glyma04g07400.1 1110 82.1 88.5  
LJGI gnl|LJGI|TC78168 1273 99.8 99.8 similar to UniRef100_A7P5N0 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (29%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0292189.1 length: 718 aa.
IPR005475 Transketolase-like, pyrimidine-binding domain
method AccNumber shortName E-value location
HMMPfam PF02779 Transket_pyr 1.5e-31 398-558
HMMSmart SM00861 Transketolase, 9.7e-49 397-562
IPR005476 Transketolase, C-terminal
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
HMMPfam PF02780 Transketolase_C 1.2e-32 575-698
IPR005477 Deoxyxylulose-5-phosphate synthase
Molecular Function GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity    
Biological Process GO:0016114 terpenoid biosynthetic process    
HAMAP MF_00315 DXP_synth 35.353 77-707
HMMPfam PF13292 DXP_synthase_N 6.7e-82 78-362
HMMTigr TIGR00204 dxs: 3e-177 80-704
IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
superfamily SSF52922 TK 8.7e-37 569-708
IPR015941 Transketolase-like, C-terminal
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.50.920 no description 1.4e-33 575-706
no_ID  
Coil coil coiled-coil NA 92-113
Gene3D G3DSA:3.40.50.970 no description 1.6e-30 319-409
410-574
HMMPanther PTHR11624 DEHYDROGENASE 2.4e-275 81-718
HMMPanther PTHR11624:SF20 1-DEOXYXYLULOSE-5-PHOSPHATE 2.4e-275 81-718
Seg seg seg NA 261-279
566-579
superfamily SSF52518 Thiamin 1.1e-50 393-585
92-453
Wolf-PSORT
Lj0g3v0292189.1	chlo 12, cyto 1, pero 1, cyto_pero 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0292189.1