Miyakogusa Predicted Gene
- Lj0g3v0292159.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1KPM4_SOYBN |
84.7 |
80.0 |
90.0 |
(tr|I1KPM4) Uncharacterized protein OS=Glycine max PE=3 SV=1 |
| TAIR_pep |
AT5G46290.3 |
74.3 |
58.1 |
74.2 |
| Symbols: KASI | 3-ketoacyl-acyl carrier protein synthase I | chr5:18774439-18776629 REVERSE LENGTH=489 |
| Medicago |
Medtr8g099695.1 |
87.4 |
72.1 |
80.3 |
| 3-oxoacyl-(acyl carrier) synthase II | HC | chr8:42184507-42187794 | 20130731 |
| Soybean |
Glyma08g02850.2 |
84.7 |
80.0 |
90.0 |
|
| LJGI |
gnl|LJGI|TC74849 |
202 |
90.4 |
90.4 |
similar to UniRef100_O82520 Cluster: 3-oxoacyl-[acyl-carrier-protein] synthase; n=1; Capsicum chinense|Rep: 3-oxoacyl-[acyl-carrier-protein] synthase - Capsicum chinense (Scotch bonnet) (Bonnet pepper), partial (22%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0292159.1 |
length: 105 aa. |
| IPR016038 |
Thiolase-like, subgroup |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0008152 |
metabolic process |
|
|
| Gene3D |
G3DSA:3.40.47.10 |
no description |
0.00085 |
47-78 |
| IPR016039 |
Thiolase-like |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0008152 |
metabolic process |
|
|
| superfamily |
SSF53901 |
Thiolase-like |
2.4e-07 |
35-98 |
| no_ID |
|
| HMMPanther |
PTHR11712 |
POLYKETIDE |
7.9e-17 |
50-99 |
| HMMPanther |
PTHR11712:SF116SUBFAMILY |
NOT |
7.9e-17 |
50-99 |
| Seg |
seg |
seg |
NA |
14-37 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
11 |
33 |
- Wolf-PSORT
Lj0g3v0292159.1 chlo 3, cyto 2.5, cyto_E.R. 2.5, plas 2, extr 2, vacu 2, E.R. 1.5, chlo_mito 1.5, nucl_plas 1.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0292159.1 |
|