Miyakogusa Predicted Gene

Lj0g3v0292029.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B9SVQ9_RICCO 246 62.6 73.7 (tr|B9SVQ9) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0009800 PE=4 SV=1
TAIR_pep AT5G09850.1 176 50.3 61.5 | Symbols: | Transcription elongation factor (TFIIS) family protein | chr5:3063488-3065221 REVERSE LENGTH=353
Medicago Medtr3g095380.1 211 57.3 69.8 | transcription elongation factor (TFIIS) family protein | HC | chr3:43576349-43579439 | 20130731
Soybean Glyma08g15430.1 245 65.6 71.8  
LJGI gnl|LJGI|TC60127 1154 100.0 100.0 similar to UniRef100_A7Q7A6 Cluster: Chromosome chr18 scaffold_59, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_59, whole genome shotgun sequence - Vitis vinifera (Grape), partial (54%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0292029.2 length: 194 aa.
IPR017923 Transcription factor IIS, N-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006351 transcription, DNA-dependent    
Gene3D G3DSA:1.20.930.10 no description 5.8e-16 1-53
HMMPfam PF08711 Med26 1.1e-12 2-44
ProfileScan PS51319 TFIIS_N 22.065 1-46
superfamily SSF47676 Conserved 6.1e-14 1-60
no_ID  
Coil coil coiled-coil NA 142-170
HMMPanther PTHR15141 TRANSCRIPTION 4.3e-51 1-192
HMMPanther PTHR15141:SF34 TRANSCRIPTION 4.3e-51 1-192
Seg seg seg NA 102-128
Wolf-PSORT
Lj0g3v0292029.2	nucl 11, cyto 1, mito 1, plas 1, mito_plas 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0292029.2