Miyakogusa Predicted Gene
- Lj0g3v0291859.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SBK6_LOTJA |
155 |
98.7 |
100.0 |
(tr|I3SBK6) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT3G48530.1 |
116 |
75.3 |
83.6 |
| Symbols: KING1 | SNF1-related protein kinase regulatory subunit gamma 1 | chr3:17987559-17989592 FORWARD LENGTH=424 |
| Medicago |
Medtr4g103550.1 |
155 |
92.0 |
98.7 |
| SNF1-related kinase regulatory subunit gamma 1 | HC | chr4:42801133-42797980 | 20130731 |
| Soybean |
Glyma17g13880.1 |
149 |
89.3 |
96.0 |
|
| LJGI |
gnl|LJGI|TC57945 |
454 |
100.0 |
100.0 |
similar to UniRef100_Q7XYY0 Cluster: AKIN gamma; n=1; Medicago truncatula|Rep: AKIN gamma - Medicago truncatula (Barrel medic), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0291859.1 |
length: 75 aa. |
| IPR000644 |
Cystathionine beta-synthase, core |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMPfam |
PF00571 |
CBS |
7.7e-14 |
1-52 |
| HMMSmart |
SM00116 |
Domain |
1.1e-08 |
4-52 |
| ProfileScan |
PS51371 |
CBS |
13.585 |
1-59 |
| IPR013785 |
Aldolase-type TIM barrel |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Gene3D |
G3DSA:3.20.20.70 |
no description |
3.2e-13 |
1-54 |
| no_ID |
|
| HMMPanther |
PTHR13780 |
AMP-ACTIVATED |
1.2e-15 |
6-75 |
| superfamily |
SSF54631 |
CBS-domain |
2.2e-11 |
1-71 |
- Wolf-PSORT
Lj0g3v0291859.1 cyto 9, mito 2, E.R. 1, pero 1, cysk 1, chlo_mito 1, cyto_mito 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0291859.1 |
|