Miyakogusa Predicted Gene
- Lj0g3v0291659.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
M5XET8_PRUPE |
117 |
87.1 |
96.8 |
(tr|M5XET8) Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006541mg PE=4 SV=1 |
| TAIR_pep |
AT1G15030.1 |
91.3 |
70.5 |
78.7 |
| Symbols: | Protein of unknown function (DUF789) | chr1:5177895-5179853 FORWARD LENGTH=360 |
| Medicago |
Medtr1g110070.1 |
112 |
85.2 |
93.4 |
| DUF789 family protein | HC | chr1:49637958-49633404 | 20130731 |
| Soybean |
Glyma10g41730.1 |
96.3 |
78.7 |
83.6 |
|
| LJGI |
gnl|LJGI|TC73529 |
127 |
86.1 |
86.1 |
weakly similar to UniRef100_A7PGX7 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (68%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0291659.1 |
length: 62 aa. |
| IPR008507 |
Protein of unknown function DUF789 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF05623 |
DUF789 |
1.4e-19 |
2-59 |
| no_ID |
|
| HMMPanther |
PTHR31343 |
FAMILY |
2.1e-22 |
1-62 |
| HMMPanther |
PTHR31343:SF0 |
SUBFAMILY |
2.1e-22 |
1-62 |
- Wolf-PSORT
Lj0g3v0291659.1 chlo 4, cyto_nucl 3.33333, cyto 3, nucl 2.5, cyto_E.R. 2.33333, plas 1, extr 1, vacu 1, cysk 1, cysk_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0291659.1 |
|