Miyakogusa Predicted Gene
- Lj0g3v0291129.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3T6M0_MEDTR |
83.2 |
66.7 |
80.3 |
(tr|I3T6M0) Uncharacterized protein OS=Medicago truncatula PE=4 SV=1 |
| TAIR_pep |
AT1G55365.1 |
65.5 |
45.6 |
60.3 |
| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13500.1); Has 29 Blast hits to 29 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:20673983-20674363 REVERSE LENGTH=126 |
| Medicago |
Medtr8g088460.1 |
83.2 |
66.7 |
81.8 |
| transmembrane protein, putative | HC | chr8:36662935-36664721 | 20130731 |
| Soybean |
Glyma08g13190.1 |
50.8 |
68.4 |
78.9 |
|
| LJGI |
gnl|LJGI|TC62883 |
381 |
100.0 |
100.0 |
UniRef100_Q567D6 Cluster: Rbm39b protein; n=1; Danio rerio|Rep: Rbm39b protein - Danio rerio (Zebrafish) (Brachydanio rerio), partial (9%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0291129.1 |
length: 98 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Seg |
seg |
seg |
NA |
67-91 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
1 |
23 |
| 45 |
66 |
- Wolf-PSORT
Lj0g3v0291129.1 chlo 7, extr 4, nucl 1, cyto 1, E.R. 1, cyto_nucl 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0291129.1 |
|