Miyakogusa Predicted Gene
- Lj0g3v0290919.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3T1G3_LOTJA |
360 |
100.0 |
100.0 |
(tr|I3T1G3) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G21780.2 |
251 |
70.7 |
85.1 |
| Symbols: | BTB/POZ domain-containing protein | chr1:7652476-7653866 FORWARD LENGTH=326 |
| Medicago |
Medtr1g029850.1 |
288 |
78.7 |
89.7 |
| BTB/POZ domain plant protein | HC | chr1:10376822-10380705 | 20130731 |
| Soybean |
Glyma14g23960.1 |
276 |
79.9 |
87.9 |
|
| LJGI |
gnl|LJGI|TC72041 |
722 |
98.5 |
98.5 |
similar to UniRef100_A7NVE2 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (38%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0290919.1 |
length: 174 aa. |
| IPR000210 |
BTB/POZ-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMSmart |
SM00225 |
Broad-Complex, |
1.5e-16 |
8-109 |
| ProfileScan |
PS50097 |
BTB |
14.791 |
8-70 |
| IPR011333 |
BTB/POZ fold |
| Gene3D |
G3DSA:3.30.710.10 |
no description |
2.2e-17 |
1-107 |
| superfamily |
SSF54695 |
POZ |
1e-17 |
1-109 |
| IPR013069 |
BTB/POZ |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMPfam |
PF00651 |
BTB |
7.7e-20 |
2-107 |
| no_ID |
|
| HMMPanther |
PTHR24413 |
FAMILY |
6.2e-72 |
1-169 |
| HMMPanther |
PTHR24413:SF39 |
SUBFAMILY |
6.2e-72 |
1-169 |
- Wolf-PSORT
Lj0g3v0290919.1 cyto 5.5, nucl 5, cyto_E.R. 3.83333, E.R._vacu 1.33333, plas 1, extr 1, E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0290919.1 |
|