Miyakogusa Predicted Gene

Lj0g3v0290529.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S471_LOTJA 399 80.8 80.8 (tr|I3S471) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G65690.1 229 46.0 61.5 | Symbols: | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr1:24431642-24432898 REVERSE LENGTH=252
Medicago Medtr3g063310.1 294 58.6 68.1 | late embryogenesis abundant hydroxyproline-rich glycoprotein | HC | chr3:28678557-28679754 | 20130731
Soybean Glyma18g05450.1 285 59.4 69.5  
LJGI gnl|LJGI|TC62532 1495 100.0 100.0 weakly similar to UniRef100_A7PTL1 Cluster: Chromosome undetermined scaffold_30, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_30, whole genome shotgun sequence - Vitis vinifera (Grape), partial (79%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0290529.1 length: 250 aa.
IPR004864 Late embryogenesis abundant protein, LEA-14
method AccNumber shortName E-value location
HMMPfam PF03168 LEA_2 8.2e-13 122-225
no_ID  
HMMPanther PTHR31852 FAMILY 6.8e-41 39-248
Seg seg seg NA 56-69
71-80
182-192
208-220
Putative transmembrane regions
  From To
TM segments
SOSUI		 65 87
Wolf-PSORT
Lj0g3v0290529.1	nucl 7, cyto 4, vacu 2, cyto_pero 2, cyto_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0290529.1