Miyakogusa Predicted Gene

Lj0g3v0290509.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MMW2_SOYBN 755 80.8 88.8 (tr|I1MMW2) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT4G35560.1 474 53.5 71.6 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr4:16881562-16886878 FORWARD LENGTH=1049
Medicago Medtr8g073335.1 736 78.4 86.8 | transducin/WD40 repeat protein | HC | chr8:31102699-31113605 | 20130731
Soybean Glyma16g22050.1 756 80.8 88.8  
LJGI gnl|LJGI|DC593169 99.6 86.8 86.8 similar to UniRef100_A7QWN1 Cluster: Chromosome chr4 scaffold_205, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome chr4 scaffold_205, whole genome shotgun sequence - Vitis vinifera (Grape), partial (12%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0290509.1 length: 455 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMSmart SM00320 WD40 3.5 186-225
253-288
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 6.4e-15 153-355
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
superfamily SSF50978 WD40 1.8e-15 55-353
no_ID  
HMMPanther PTHR24573 FAMILY 2.1e-14 401-455
HMMPanther PTHR24573:SF7 SUBFAMILY 2.1e-14 401-455
Wolf-PSORT
Lj0g3v0290509.1	nucl 7, cyto 6
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0290509.1