Miyakogusa Predicted Gene
- Lj0g3v0289119.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7JLB0_MEDTR |
1215 |
90.8 |
95.3 |
(tr|G7JLB0) SNARE-interacting protein KEULE OS=Medicago truncatula GN=MTR_4g102120 PE=4 SV=1 |
| TAIR_pep |
AT1G12360.1 |
1028 |
76.3 |
88.2 |
| Symbols: KEU | Sec1/munc18-like (SM) proteins superfamily | chr1:4201172-4206144 FORWARD LENGTH=666 |
| Medicago |
Medtr4g102120.1 |
1215 |
90.8 |
95.3 |
| SNARE-interacting KEULE-like protein | HC | chr4:42294471-42279475 | 20130731 |
| Soybean |
Glyma05g03970.1 |
1212 |
91.1 |
94.8 |
|
| LJGI |
gnl|LJGI|TC80561 |
1606 |
98.0 |
98.0 |
similar to UniRef100_Q9C5X3 Cluster: SNARE-interacting protein KEULE; n=1; Arabidopsis thaliana|Rep: SNARE-interacting protein KEULE - Arabidopsis thaliana (Mouse-ear cress), partial (40%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0289119.1 |
length: 646 aa. |
| IPR001619 |
Sec1-like protein |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006904 |
vesicle docking involved in exocytosis |
|
|
| Biological Process |
GO:0016192 |
vesicle-mediated transport |
|
|
| HMMPanther |
PTHR11679 |
VESICLE |
0 |
12-646 |
| HMMPfam |
PF00995 |
Sec1 |
1.7e-125 |
26-631 |
| superfamily |
SSF56815 |
Sec1/munc18-like |
2e-146 |
21-637 |
| IPR027482 |
Sec1-like, domain 2 |
| Gene3D |
G3DSA:3.40.50.1910 |
no description |
1.3e-33 |
579-636 |
| no_ID |
|
| Gene3D |
G3DSA:1.25.40.60 |
no description |
1.8e-13 |
379-497 |
| Gene3D |
G3DSA:3.40.50.2060 |
no description |
1.5e-44 |
8-133 |
| Gene3D |
G3DSA:3.90.830.10 |
no description |
9.6e-36 |
254-375 |
| HMMPanther |
PTHR11679:SF5 |
PLANT |
0 |
12-646 |
| Seg |
seg |
seg |
NA |
480-487 |
- Wolf-PSORT
Lj0g3v0289119.1 cyto 10, nucl 2, chlo 1, golg 1, cysk_nucl 1, nucl_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0289119.1 |
|