Miyakogusa Predicted Gene

Lj0g3v0288979.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K3I1_SOYBN 657 92.4 94.2 (tr|I1K3I1) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G30330.1 610 86.0 90.4 | Symbols: ARF6 | auxin response factor 6 | chr1:10686125-10690036 REVERSE LENGTH=933
Medicago Medtr2g018690.1 634 89.5 92.1 | auxin response factor 2 | HC | chr2:5912688-5906356 | 20130731
Soybean Glyma05g27580.1 657 92.4 94.2  
LJGI gnl|LJGI|TC64953 1015 99.6 99.6 homologue to UniRef100_Q6L8U1 Cluster: Auxin response factor 3; n=1; Cucumis sativus|Rep: Auxin response factor 3 - Cucumis sativus (Cucumber), partial (26%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0288979.2 length: 346 aa.
IPR003340 B3 DNA binding domain
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02362 B3 1.1e-22 127-227
HMMSmart SM01019 B3 6.7e-25 127-229
ProfileScan PS50863 B3 12.830 127-229
IPR010525 Auxin response factor
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Biological Process GO:0009725 response to hormone stimulus    
HMMPfam PF06507 Auxin_resp 1e-33 253-336
IPR015300 DNA-binding pseudobarrel domain
Gene3D G3DSA:2.40.330.10 no description 1e-41 119-242
superfamily SSF101936 DNA-binding 3.1e-54 110-257
no_ID  
HMMPanther PTHR31384 FAMILY 1.8e-199 1-337
Seg seg seg NA 251-258
Wolf-PSORT
Lj0g3v0288979.2	nucl 7, cyto 6
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0288979.2