Miyakogusa Predicted Gene
- Lj0g3v0288779.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7LFI2_MEDTR |
126 |
50.4 |
64.0 |
(tr|G7LFI2) F-box protein OS=Medicago truncatula GN=MTR_8g063440 PE=4 SV=1 |
| TAIR_pep |
--No_Hits--
|
|
|
|
|
| Medicago |
Medtr8g063440.1 |
126 |
50.4 |
64.0 |
| F-box protein interaction domain protein | HC | chr8:26606178-26607478 | 20130731 |
| Soybean |
Glyma03g35240.1 |
101 |
48.9 |
62.4 |
|
| LJGI |
gnl|LJGI|TC77125 |
329 |
87.0 |
87.0 |
weakly similar to UniRef100_A2Q228 Cluster: Cyclin-like F-box; F-box protein interaction domain; n=1; Medicago truncatula|Rep: Cyclin-like F-box; F-box protein interaction domain - Medicago truncatula (Barrel medic), partial (32%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0288779.1 |
length: 136 aa. |
| IPR006527 |
F-box associated domain, type 1 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF07734 |
FBA_1 |
3.6e-13 |
1-126 |
| IPR017451 |
F-box associated interaction domain |
| HMMTigr |
TIGR01640 |
F_box_assoc_1: |
3.3e-11 |
1-108 |
- Wolf-PSORT
Lj0g3v0288779.1 cyto 8, extr 2, cysk 2, nucl 1, golg 1, cysk_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0288779.1 |
|