Miyakogusa Predicted Gene

Lj0g3v0288719.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K3ZQS9_SETIT 328 42.1 61.5 (tr|K3ZQS9) Uncharacterized protein OS=Setaria italica GN=Si028959m.g PE=4 SV=1
TAIR_pep AT3G53690.1 270 51.9 72.5 | Symbols: | RING/U-box superfamily protein | chr3:19898997-19900044 REVERSE LENGTH=320
Medicago Medtr2g044440.1 303 69.7 82.8 | zinc finger, C3HC4 type (RING finger) protein | HC | chr2:19326432-19327307 | 20130731
Soybean Glyma09g08670.1 295 62.7 76.0  
LJGI gnl|LJGI|TC72360 1015 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0288719.1 length: 493 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00184 Ring 2.1 87-137
286-333
446-489
ProfileScan PS50089 ZF_RING_2 8.845 87-138
286-332
446-490
IPR002867 Zinc finger, C6HC-type
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF01485 IBR 6.5e-06 167-220
363-416
437-478
HMMSmart SM00647 In 0.062 158-220
354-416
426-489
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 6.2e-05 284-348
IPR017907 Zinc finger, RING-type, conserved site
PatternScan PS00518 ZF_RING_1 NA 304-313
IPR018957 Zinc finger, C3HC4 RING-type
HMMPfam PF00097 zf-C3HC4 0.00026 87-135
286-331
no_ID  
HMMPanther PTHR11685 ARIADNE 2.3e-109 283-493
HMMPanther PTHR11685:SF63 OS11G0103400 2.3e-109 283-493
Seg seg seg NA 99-113
superfamily SSF57850 RING/U-box 1.8e-06 279-377
80-181
426-491
353-421
224-269
157-223
Wolf-PSORT
Lj0g3v0288719.1	mito 5.5, chlo 5, cyto_mito 3.5, nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0288719.1